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Whole Genome Sequence Analysis

Bioinformatics Coach via YouTube

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This beginner course demonstrates computational workflows for bacterial whole-genome analysis, including assembly from Oxford Nanopore reads, comparative genomics, antimicrobial resistance gene identification, phylogenetic tree construction, and variant calling.

Syllabus

A bioinformatics tutorial on Bacterial Genome Analysis | Comparative Genomics.
A bioinformatics tutorial on how to identify Antimicrobial Resistance Genes | Abricate | Beginners.
Build Phylogenetic Trees based on Gene Sequences.
Genome Assembly Tutorial | ONT reads | FLYE | Bioinformatics for Beginners.
Variant Calling using Snippy | Microbial Bioinformatics | Bioinformatics for Beginners | Course.

Taught by

Bioinformatics Coach

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