Genomics

This beginner course introduces practical genomic analysis workflows, including genome assembly and annotation, comparative genomics, visualization, phylogenetic tree construction, and antimicrobial resistance gene identification.

Syllabus

Bioinformatics for beginners | Course | Genome Assembly and Annotation | llumina Reads | SPAdes.
A bioinformatics tutorial on Genome comparison using BRIG software.
A bioinformatics tutorial on GENOME ASSEMBLY | COMBINING NANOPORE AND ILLUMINA READS.
Bioinformatics for beginners | Course | Genome Assembly and Annotation | Bacterial Genomes | Prokka.
A bioinformatics tutorial on Bacterial Genome Analysis | Comparative Genomics.
Create phylogenetic trees using MUSCLE and PHYML.
CREATE MANHATTAN PLOT OF FST VALUES USING PYTHON.
Bioinformatics for Beginners | Course | Genome visualization using the online CGView tool.
Genome Visualization using Artemis (DNAPlotter) | Bioinformatics for Beginners | Course | Tutorial.
A bioinformatics tutorial on how to identify Antimicrobial Resistance Genes | Abricate | Beginners.
Build Phylogenetic Trees based on Gene Sequences.
How to Build Phylogenetic Trees using RAxML and iTOL | Bioinformatics for Beginners |Tutorial.
Visualize phylogenetic trees using iTOL.
Genome Assembly Tutorial | ONT reads | FLYE | Bioinformatics for Beginners.