Single-Cell Analysis Courses and Certifications

International Centre for Theoretical Sciences

A Mathematical Adventure in Immunology by Carmen Molina-Paris

Explore the immune system's complexity through mathematical modeling, examining cell interactions, disease prevention, and quantifying pathogen infectivity.

• YouTube
• 1 hour 43 minutes
• Self-Paced
• Free Video

The Julia Programming Language

Julia for Biologists - A Perspective on Speed, Abstraction, and Metaprogramming

Explore Julia's potential in biology: speed, abstraction, and metaprogramming for data analysis, modeling, and research. Learn practical examples and discover the Julia ecosystem for biologists.

• YouTube
• 38 minutes
• Self-Paced
• Free Video

APS Physics

Illuminating Biology at the Nanoscale with Single-Molecule and Super-Resolution Fluorescence Microscopy

Explore super-resolution fluorescence microscopy techniques like STORM and MERFISH, enabling nanoscale imaging of cellular structures and RNA quantification for groundbreaking biological discoveries.

• YouTube
• 40 minutes
• Self-Paced
• Free Video

American Society for Microbiology

Diabetes, Malaria, and a New Kingdom of Life - Microbial Minutes

Explore recent microbiology research on diabetes, malaria, and a newly discovered kingdom of life. Learn about gut microbiome's role in insulin resistance and the latest developments in malaria treatment and prevention.

• YouTube
• 38 minutes
• Self-Paced
• Conference Talk

Computational Genomics Summer Institute CGSI

Inference of Gene Regulatory Networks from Bulk and Single Cell Omic Datasets

Explore gene regulatory network inference techniques using bulk and single-cell omic datasets. Learn about integrative approaches, predictive models, and applications in cellular reprogramming and single-cell genomics.

• YouTube
• 42 minutes
• Self-Paced
• Free Video

Valence Labs

Predicting Single-Cell Perturbation Responses for Unseen Drugs

Explore single-cell perturbation response prediction for novel drugs using an encoder-decoder architecture and transfer learning, enhancing drug discovery efficiency through in-silico hypothesis generation.

• YouTube
• 58 minutes
• Self-Paced
• Free Video

Broad Institute

Beyond Cells: The Importance of Gene Programs and Tissue Context

Explore gene programs and tissue context beyond individual cells, uncovering novel insights into pressing biomedical questions through advanced machine learning techniques.

• YouTube
• 1 hour 7 minutes
• Self-Paced
• Free Video

Broad Institute

Generative AI for Modeling Single-Cell Responses

Explore generative AI applications in single-cell response modeling, covering data integration, representation learning, and multiomics analysis for biomedical insights.

• YouTube
• 1 hour 2 minutes
• Self-Paced
• Free Video

Broad Institute

High-Throughput In Silico Genetic Screen for 3D Genome Organization - Models, Inference and Algorithms

Explore cutting-edge approaches in 3D genome organization research, including in silico genetic screening and graph representation learning for analyzing multiscale chromatin structure.

• YouTube
• 1 hour 50 minutes
• Self-Paced
• Free Video

Broad Institute

Neural Optimal Transport for Inferring Single-Cell Responses to Perturbations

Explore neural optimal transport methods for predicting single-cell responses to perturbations, uncovering insights into molecular processes and treatment outcomes at unprecedented resolution.

• YouTube
• 1 hour 51 minutes
• Self-Paced
• Free Video

MITCBMM

Big Science, Team Science & Open Science to Understand Neocortex

Explore the human brain's complexity through big science, team science, and open science approaches, focusing on neocortex understanding and innovative research methods.

• YouTube
• 1 hour 8 minutes
• Self-Paced
• Free Video

Open Data Science

Interpretable Machine Learning to Model Drug Perturbations in Single Cell Genomics

Explore interpretable machine learning for modeling drug effects on single-cell genomics. Learn about deep autoencoders, manifold identification, and predicting novel perturbations in cellular states.

• YouTube
• 36 minutes
• Self-Paced
• Free Video

International Centre for Theoretical Sciences

Advances in Predictive Models for Single-cell and Regulatory Genomics

Explore cutting-edge predictive models for single-cell and regulatory genomics, enhancing understanding of cancer progression and potential treatment approaches.

• YouTube
• 1 hour 14 minutes
• Self-Paced
• Free Video

International Centre for Theoretical Sciences

Inferring Cell-state Dynamics from High-resolution Lineage Tracking of Single Cells

Explore cell-state dynamics through high-resolution lineage tracking, uncovering insights into cancer progression and potential treatment approaches in this theoretical biology lecture.

• YouTube
• 1 hour 34 minutes
• Self-Paced
• Free Video

International Centre for Theoretical Sciences

To Live or Not to Live - Decision Making in Single Cancer Cells - Lecture 1

Explore decision-making processes in individual cancer cells, examining factors influencing cell survival and death. Gain insights into cellular behavior and its implications for cancer progression and treatment.

• YouTube
• 1 hour 7 minutes
• Self-Paced
• Free Video