Federated Analysis for Germline Variant Interpretation in Cancer Genomics
Cancer Genomics Consortium via YouTube
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Overview
Syllabus
Intro
Genetics can have a strong impact on cancer susceptibility
Issue: Widespread Variants of Uncertain Significance (VUS)
Evidence for VUS Interpretation
What about data sharing?
Privacy-preserving data sharing through federated analysis
Federated Allele Frequency Estimation
Federated RNAseq Analysis in Pediatric Cancer
Four Vital Components for Federated Analysis
Technology: Containers and Workflows
Challenge: Demonstrating workflow security
Data Specifications and Standards
Data Sharing Policy Compliance
Federated analysis of BioBank Japan Data
Taught by
Cancer Genomics Consortium