Computational Genomics Summer Institute CGSI Courses

The Functional Architectures of Human Diseases and Complex Traits: From Polygenicity to Variant Function

Explore functional architectures of human diseases and complex traits, focusing on polygenicity and variant function in genomics research.

• YouTube
• 37 minutes
• On-Demand
• Free Video

Genome-wide Prediction of Disease Variants with a Deep Protein Language Model

Explore genome-wide prediction of disease variants using deep protein language models. Learn cutting-edge techniques for identifying potential genetic causes of diseases.

• YouTube
• 32 minutes
• On-Demand
• Free Video

Applications of Deep Learning in Digital Pathology and Embryology - CGSI 2023

Explore deep learning applications in digital pathology and embryology, focusing on AI-driven blastocyst ploidy prediction and tumor purity assessment from H&E slides.

• YouTube
• 42 minutes
• On-Demand
• Free Video

Confounding in Biobanks: Challenges and Implications

Explore confounding factors in biobank research and their impact on genetic studies, focusing on educational attainment and height analyses.

• YouTube
• 45 minutes
• On-Demand
• Free Video

Training Highly Generalizable Biomedical Image Segmentation Models with Very Few Annotations

Learn highly generalizable biomedical image segmentation techniques using minimal annotations, focusing on efficient model training and performance optimization for medical imaging tasks.

• YouTube
• 28 minutes
• On-Demand
• Free Video

From Population to Person - How to Help a Single, Actual Person with Data Science

Discover how data science can be applied to help individual patients, bridging the gap between population-level insights and personalized healthcare interventions.

• YouTube
• 38 minutes
• On-Demand
• Free Video

Revisiting Out-of-Distribution Generalization

Explore out-of-distribution generalization in machine learning, focusing on nuisance-induced spurious correlations and strategies for robust model performance across diverse datasets.

• YouTube
• 37 minutes
• On-Demand
• Free Video

Methods for Disease Analysis Using Multiomic Data

Explore advanced methods for analyzing diseases using multiomic data, focusing on clustering algorithms, cancer subtyping, and driver gene prioritization.

• YouTube
• 38 minutes
• On-Demand
• Free Video

Living in the Future of Genomics

Explore cutting-edge genomics research and its future implications with insights from Rayan Chikhi at the Computational Genomics Summer Institute.

• YouTube
• 49 minutes
• On-Demand
• Free Video

Ways to Find Confounding in Biobanks - CGSI 2023

Explore methods for identifying confounding factors in biobank research, focusing on polygenic prediction and genetic associations in large-scale studies.

• YouTube
• 44 minutes
• On-Demand
• Free Video

Computational Analysis of Liver Whole Slide Images Empowers Genomic Analyses of Historical Traits

Explore computational analysis of liver whole slide images to enhance genomic studies of historical traits. Learn advanced techniques for quantifying histologic features in non-alcoholic steatohepatitis.

• YouTube
• 40 minutes
• On-Demand
• Free Video

Recent Advances in Normalizing Flows - CGSI 2023

Explore recent advancements in normalizing flows, including training from dependent data and kernelized approaches, to enhance generative modeling and density estimation techniques.

• YouTube
• 50 minutes
• On-Demand
• Free Video

Performing GWAS of Images by Combining Deep Transfer Learning with Statistical Testing

Explore innovative techniques for genome-wide association studies of images, combining deep transfer learning with statistical testing for advanced computational genomics research.

• YouTube
• 49 minutes
• On-Demand
• Free Video

Computational Biomedicine: Epigenetics, Liquid Biopsy, and Alternative Polyadenylation Therapy

Explore computational biomedicine, focusing on epigenetics, liquid biopsy, and alternative polyadenylation therapy. Gain insights into cutting-edge research and applications in genomics and cancer detection.

• YouTube
• 53 minutes
• On-Demand
• Free Video

Characterization of Genomic Structural Variation Using Various Sequencing Technologies

Explore genomic structural variation analysis using diverse sequencing technologies. Learn about copy number variation genotyping and deep learning applications in exome sequencing.

• YouTube
• 54 minutes
• On-Demand
• Free Video