Bioinformatics With BB Courses

Molecular Docking for Beginners - Autodock Full Tutorial

8 ratings

Step-by-step protein–ligand molecular docking with AutoDock to investigate small-molecule interactions in protein binding sites.

• YouTube
• 35 minutes
• Self-Paced
• Free Video

Molecular Dynamics Simulation with GROMACS - Installation and Beginner Tutorial

4 ratings

Beginner GROMACS setup on Windows or Linux followed by a molecular dynamics simulation of a protein in water.

• YouTube
• 24 minutes
• Self-Paced
• Free Video

PCR Primer Designing Using NCBI Primer BLAST - In Silico Design and Validation

3 ratings

Design and validate PCR primers in silico with NCBI Primer BLAST, using primer parameters and specificity analysis to identify suitable primer pairs.

• YouTube
• 22 minutes
• Self-Paced
• Free Video

Molecular Docking with AutoDock VINA - Script-Based Method for Multiple Ligands

2 ratings

Learn script-based AutoDock Vina workflows for preparing structures and docking multiple compounds for virtual screening.

• YouTube
• 28 minutes
• Self-Paced
• Free Video

Bioinformatics in Google Colab - A Beginner Tutorial with AI Tools

1 rating

Discover how to leverage Google Colab for bioinformatics analysis, from NGS quality control to statistical testing, enhanced with AI tools for efficient data processing and visualization.

• YouTube
• 15 minutes
• Self-Paced
• Free Video

Molecular Docking and Virtual Screening with AutoDock VINA - Bioinformatics Tutorial

1 rating

Use AutoDock Vina to virtually screen small-molecule libraries by docking compounds into protein binding sites and ranking predicted binding poses.

• YouTube
• 25 minutes
• Self-Paced
• Free Video

Beginner's Guide to Gene Expression Analysis - Bioinformatics Simplified

Master the fundamentals of gene expression analysis through hands-on practice with GEO2R and key bioinformatics tools. Learn data retrieval, differential analysis, and results interpretation for practical research applications.

• YouTube
• 22 minutes
• Self-Paced
• Free Video

Artificial Intelligence for Protein Modeling - DNA, RNA and Ion Docking Explained

Discover how AlphaFold3 revolutionizes structural biology through AI-powered protein modeling, enabling accurate predictions of 3D molecular structures, DNA/RNA interactions, and protein-protein binding mechanisms.

• YouTube
• 20 minutes
• Self-Paced
• Free Video

How AI Is Revolutionizing Bioinformatics - DNA, Proteins and Medicine

Discover how artificial intelligence transforms bioinformatics, from DNA analysis and protein prediction to drug discovery and personalized medicine breakthroughs.

• YouTube
• 12 minutes
• Self-Paced
• Free Video

Gene Expression Analysis Using GO Annotations, Cytoscape, and Enrichr Tools - Part 2

Master gene expression analysis techniques using GEO2R, Enrichr, and ClueGO to filter differentially expressed genes, perform functional annotations, and create insightful pathway visualizations.

• YouTube
• 23 minutes
• Self-Paced
• Free Video

Gene Expression Analysis Using GO Annotations, Cytoscape, and Enrichr Tools - Part 2

Master gene expression analysis techniques through hands-on exploration of GEO2R data filtering, functional annotations with Enrichr, and network visualization using Cytoscape and ClueGO plugins.

• YouTube
• 23 minutes
• Self-Paced
• Free Video

Automating Bioinformatics Tasks with AI - Web-Based Gene Sequence Searches

Discover how to automate bioinformatics web tasks using AI agents, from gene sequence searches to email automation, with a free Web UI tool and Google API integration.

• YouTube
• 12 minutes
• Self-Paced
• Free Video

DeepSeek R1 Local Installation Guide for Bioinformatics

Learn to install and configure DeepSeek R1 AI model locally on Windows and Mac, covering Ollama setup, model size selection, and Chatbox integration for offline use.

• YouTube
• 11 minutes
• Self-Paced
• Free Video

Graph ggPLOT Beginner Tutorial - Creating Simple Graphs in R

Create simple graphs in R using the ggplot2 visualization package.

• YouTube
• 37 minutes
• Self-Paced
• Free Video

PyMol Advanced Session: Protein-Ligand Interactions and Plugin Installation

Explore advanced PyMOL features for visualizing protein–ligand interactions, annotating structures, installing plugins, and examining hydrogen bonds and disulfide bonds.

• YouTube
• 30 minutes
• Self-Paced
• Free Video