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Using Containers on HPC Systems with Apptainer

NHR@FAU via YouTube

Overview

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Learn to containerize your code for high-performance computing systems in this hands-on HPC Café session. Discover how to transition from Python and Conda environments to containerized solutions using Apptainer on NHR@FAU's HPC systems. Master the fundamentals of creating and downloading containers, implementing best practices for deployment, and seamlessly integrating containers with Slurm for both batch jobs and interactive runs. Explore techniques for encapsulating your existing Conda environments within containers to enhance portability and reproducibility of your research projects. Gain practical knowledge of troubleshooting common issues and optimizing container performance, while acquiring ready-to-use containerization recipes that you can immediately apply to your HPC workflows.

Syllabus

HPC Café: Using containers on the HPC systems at NHR@FAU

Taught by

NHR@FAU

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