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Biopython

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Overview

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This course introduces practical bioinformatics workflows with Biopython, including FASTA and FASTQ processing, transcription and translation, NCBI access, sequence alignment, BLAST, motif analysis, and sequence visualization.

Syllabus

Bioinformatics How to read FASTA files with Python and Biopython Tutorial.
Bioinformatics From DNA to RNA to Protein using Biopython [Transcription and Translation].
Bioinformatics Analysis of Quality Scores from FASTQ file using Biopython.
Bioinformatics Accessing NCBI databases and tools with Biopython [Entrez].
Bioinformatics Pairwise sequence alignment/pairwise2 in Biopython.
Bioinformatics Running BLAST queries and performing sequence alignment with Biopython.
Bioinformatics COVID-19 Genome Sequence Analysis using Biopython.
Bioinformatics COVID-19 BLAST search using Biopython.
Bioinformatics COVID-19 3D protein visualisation using Biopython and nglview.
Bioinformatics Creating and handling Sequence motif objects in Biopython.
Bioinformatics Plotting sequence lengths and GC content with Biopython and matplotlib.
Bioinformatics Faster reads of sequence FASTA and FASTQ files with Biopython.
Bioinformatics Sorting big FASTA/FASTQ files by sequence length with Biopython.
Bioinformatics Filtering FASTQ files by PHRED quality scores with Biopython.
Bioinformatics with Biopython - Full Course | 1 hour Python for Bioinformatics tutorial.

Taught by

Lana Caldarevic

Reviews

4.5 rating, based on 2 Class Central reviews

Start your review of Biopython

  • Profile image for Ashish Thotwe
    Ashish Thotwe
    it was good and understanding and in depth learning i like all the videos explaination and learned some valubale topics using biopython , now im confident in biopython
  • Profile image for Subaragavi Ilavarasan
    Subaragavi Ilavarasan
    The course was really amazing, and the teacher was really awesome. I like her teaching skills.and the way of explain is really helpfull to me. Please provide the certificate.

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