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Bioinformatics in Python - DNA Toolkit

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Overview

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This course teaches Python-based analysis of DNA and RNA sequences, covering nucleotide validation, transcription, translation, GC content, open reading frames, protein searches, and code refactoring into a reusable sequence class.

Syllabus

Bioinformatics in Python: Intro.
Bioinformatics in Python: DNA Toolkit. Part 1: Validating and counting nucleotides..
Bioinformatics in Python: DNA Toolkit. Part 2: Transcription, Reverse Complement.
Bioinformatics in Python: DNA Toolkit. Part 3: GC Content Calculation.
Bioinformatics in Python: DNA Toolkit. Part 4: Translation, Codon Usage.
Bioinformatics in Python: DNA Toolkit. Part 5: Open Reading Frames.
Bioinformatics in Python: DNA Toolkit. Part 6: Protein search in a reading frame.
Bioinformatics in Python: DNA Toolkit. Part 7: A search for a real protein from NCBI database.
Bioinformatics in Python: DNA Toolkit. Part 8.1: Code refactoring into a bio_seq class.
Bioinformatics in Python: DNA Toolkit. Part 8.2: Code refactoring into a bio_seq class.
Bioinformatics in Python: DNA Toolkit. Part 9: RNA, Helper functions.

Taught by

rebelScience

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