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Illumina DRAGEN Pipelines on F2 Instances with Nextflow and AWS Batch

AWS Events via YouTube

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Overview

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Navigate the critical transition from F1 to F2 instances for Illumina DRAGEN genomics pipelines in this 18-minute conference talk from AWS re:Invent 2025. Discover optimal configuration strategies for DRAGEN pipelines using Nextflow and AWS Batch as F1's end-of-life approaches in December 2025. Master performance optimization techniques and monitoring strategies essential for genomics workflows. Explore practical solutions for common debugging challenges through real-world examples and gain valuable insights from a biopharma migration case study. Learn best practices for implementing complex genomics workflows whether you're new to DRAGEN or planning an F1 to F2 migration. Perfect for bioinformaticians, life sciences developers, and IT infrastructure owners managing genomics computing environments.

Syllabus

AWS re:Invent 2025 - Illumina DRAGEN pipelines on F2 instances with Nextflow & AWS Batch (CMP353)

Taught by

AWS Events

Reviews

5.0 rating, based on 1 Class Central review

Start your review of Illumina DRAGEN Pipelines on F2 Instances with Nextflow and AWS Batch

  • Daniel Julian
    It is a simple course and not very detailed, but it is a good way to start in the world of bioinformatics and pipeline development.
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