Phylogenetics & Systematics Courses and Certifications

Computational Genomics Summer Institute CGSI

Statistically Consistent Estimation of Level-1 Phylogenetic Networks from SNPs

Explore statistically consistent methods for estimating level-1 phylogenetic networks from SNP data, focusing on rooted and unrooted structures in computational genomics.

• YouTube
• 20 minutes
• Self-Paced
• Free Video

Simons Foundation

Complex Discrete Probability Models in Evolutionary Biology - Challenges and Opportunities

Explore discrete probability models in evolutionary biology, focusing on phylogeny reconstruction challenges from genomic data and gene tree discordance phenomena.

• YouTube
• 1 hour 5 minutes
• Self-Paced
• Free Video

Erwin Schrödinger International Institute for Mathematics and Physics (ESI)

Evolutionary Changes in Charge on Spike Protein of SARS-CoV-2

Explore evolutionary patterns of SARS-CoV-2 spike protein charge changes, analyzing 2600+ lineages to understand how amino acid mutations affect viral infectivity and transmissibility.

• YouTube
• 24 minutes
• Self-Paced
• Free Video

Computational Genomics Summer Institute CGSI

From Gene Trees to a Species Tree - Starting from the Basics

Discover phylogenetic reconstruction methods, from gene trees to species trees, covering quartet compatibility, max cut algorithms, and tree consistency in computational genomics.

• YouTube
• 56 minutes
• Self-Paced
• Free Video

Computational Genomics Summer Institute CGSI

Incomplete Lineage Sorting - Phylogenetics Meets Population Genetics

Explore incomplete lineage sorting where phylogenetics intersects with population genetics, covering multispecies coalescent theory and direct species tree inference methods.

• YouTube
• 50 minutes
• Self-Paced
• Free Video

International Centre for Theoretical Sciences

Phylogenetics: Recovering Evolutionary History - Lecture 1

Explore evolutionary history reconstruction through phylogenetics. Learn techniques for analyzing genetic data to understand species relationships and evolutionary processes over time.

• YouTube
• 1 hour 47 minutes
• Self-Paced
• Free Video

Institut Henri Poincaré

Sequencing Error and Phylogenetics - SARS-CoV-2 Transmission in Hospitals

Explore sequencing errors, phylogenetics, and SARS-CoV-2 transmission in hospitals with insights from a Cambridge researcher.

• YouTube
• 29 minutes
• Self-Paced
• Free Video

Institut Henri Poincaré

New Methods for Large-Scale Species Tree Estimation Addressing Gene Duplication and Loss

Explore cutting-edge techniques for estimating large-scale species trees, addressing gene duplication and loss challenges in phylogenetics.

• YouTube
• 30 minutes
• Self-Paced
• Free Video

Institut Henri Poincaré

Bayesian Phylogeography Along a Continuum: Sampling Its Way in a Random Walk

Explore Bayesian phylogeography techniques for analyzing species distribution patterns using continuous spatial models and random walk sampling methods.

• YouTube
• 31 minutes
• Self-Paced
• Free Video

Institut Henri Poincaré

ABC Phylodynamics

Explore ABC phylodynamics with Samuel Alizon, delving into advanced techniques for analyzing evolutionary dynamics of pathogens using phylogenetic data.

• YouTube
• 33 minutes
• Self-Paced
• Free Video

VinAI

Learning and Optimization over Abstract Non-Manifold Structures: A Case in Biological Data Analysis

Explore optimization techniques for complex biological data structures, focusing on phylogenetic tree inference using maximum likelihood analysis and smooth optimization methods.

• YouTube
• 1 hour 1 minute
• Self-Paced
• Free Video

Career Certificate

Plant Bioinformatic Methods

2148 ratings at Coursera

Explore plant biology through bioinformatics, covering genomics, transcriptomics, and protein interactions. Learn to use 33 plant-specific tools and apply them in a capstone project to hypothesize gene functions.

• Coursera
• 8 weeks, 10 hours/week
• Self-Paced
• Paid Course
• 4 courses

系统发育学原理与方法

系统发育学：进化论与统计学的完美结合！ Phylogeny: the perfect combination of Evolution and Statistics

• XuetangX
• Self-Paced
• Free Online Course

Bacterial Bioinformatics

312 ratings at Coursera

Hands-on training in bacterial genomics analysis using BV-BRC platform. Covers assembly, annotation, phylogenetics, and comparative genomics. Ideal for researchers seeking practical skills in bacterial bioinformatics.

• Coursera
• 13 hours 34 minutes
• Self-Paced
• Paid Course

Hacking COVID-19 — Course 5: Tracing SARS-CoV-2's Evolution

Trace SARS-CoV-2's evolution, explore COVID-19 origins, and learn bioinformatics methods for phylogenetic tree analysis. Practice skills with gradually increasing complexity.

• Coursera
• 4 hours 10 minutes
• Self-Paced
• Paid Course